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IDProjectCategoryView StatusDate SubmittedLast Update
0002371graphvizOtherpublic2013-09-17 11:492013-09-17 13:38
Reporterarsmith 
Assigned To 
PriorityimmediateSeverityblockReproducibilityalways
StatusnewResolutionopen 
PlatformMacOSLionOS Version10.7.5
Summary0002371: Permission denied
DescriptionGraphviz is installed. I've entered the file path to the Graphviz.app in the DOT command field, I get error=13 Permission denied when clicking the Preview Graph button. I'm using webstart Ontologizer and have very limited and basic experience with the command line.
 
TagsNo tags attached.
AUXILLARY-FILES
DATE-FIXED
FIX-COMMENT
FORMER-ID
INPUT-FILE
OUTPUT-FILE
STATUS-COMMENT
VERSION1
Attached Files

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-  Notes
User avatar (0000541)
erg (administrator)
2013-09-17 12:41

We are not associated with the Ontologizer software, so these will be guesses. If you gave the path to Graphviz.app, that may not be what Ontologizer needs. It wants the path to the dot program, which is usually installed in /usr/local/bin. The permission denied error sounds like the program is trying to write into a directory for which you don't have permissions.

I know that you have limited experience with the command line, but try opening a terminal window
Finder->Applications->Utilities->Termina.app. In the terminal window, type
  /usr/local/bin/dot -V
followed by return. If this returns something like
  dot - graphviz version 2.35.0 (20130917.1242)
then dot is installed correctly. You may need to contact someone involved with ontologizer to answer your question.
User avatar (0000542)
arsmith (reporter)
2013-09-17 12:49

I figured that was the issue, but I didn't know how to fix it. The file is there so I will fix the path I entered. Thanks for your help!
User avatar (0000543)
erg (administrator)
2013-09-17 13:38

I hope this works.

- Issue History
Date Modified Username Field Change
2013-09-17 11:49 arsmith New Issue
2013-09-17 12:41 erg Note Added: 0000541
2013-09-17 12:49 arsmith Note Added: 0000542
2013-09-17 13:38 erg Note Added: 0000543


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